 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.C00764.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 386aa MW: 40893.8 Da PI: 7.8812 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.C00764.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 70.7 | 2.3e-22 | 288 | 350 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L++e+++++ke+++l s++
Pahal.C00764.1 288 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRADVLKQENASLRDEVNRIRKEYEELLSKN 350
89**********************************************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MGSSGADTPS KTSKASAPQE QQPPATSGAA TPAVYPDWSS FQAYPPIPPH GFFPSPVASS 60
PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYAMT SPNGNADATG 120
TTAAAGDTDG KPSEGKDKSP TKRSKGSLGS LNMLTGKNPT EHGKTSGASA NGATSQSGES 180
GSESSSEGSE GNSQNDSHHK ESGHEQDGDV RSSQNGASRS PSEGKLNQTM AIMPMPSSGP 240
VPGPTTNLNI GMDYWANTAS STPAIHGKVT PTTVTGAVVP AEQWIQDERE LKRQRRKQSN 300
RESARRSRLR KQAECEELAQ RADVLKQENA SLRDEVNRIR KEYEELLSKN NSLKEKIEGK 360
QHKTDEAGLN NKLQHSGDDS QKKGN*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 304 | 310 | RRSRLRK |
| 2 | 304 | 311 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT034769 | 0.0 | BT034769.2 Zea mays full-length cDNA clone ZM_BFb0017D08 mRNA, complete cds. |
| GenBank | BT060689 | 0.0 | BT060689.1 Zea mays full-length cDNA clone ZM_BFb0034I13 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G32150.1 | 1e-82 | basic region/leucine zipper transcription factor 68 |
