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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C00569.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
C2H2 |
Protein Properties |
Length: 470aa MW: 51270.7 Da PI: 6.6067 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C00569.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 21.2 | 7.7e-07 | 227 | 248 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C++Cgk F+r nL+ H+r H
Pahal.C00569.1 227 FCTICGKGFKRDANLRMHMRGH 248
6*******************98 PP
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2 | zf-C2H2 | 11.1 | 0.0013 | 345 | 359 | 6 | 20 |
TTEEESSHHHHHHHH CS
zf-C2H2 6 CgksFsrksnLkrHi 20
Cg+sFsrk+ L H
Pahal.C00569.1 345 CGTSFSRKDKLFAHV 359
**************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MDHSQNHIHD QSAANLCYQF GSDNPFLGMG IQQPFAPFTS PFGACSSTNI PHMDWDPATM 60 LDNLTFIEEK IHQVKNVIRT MVDNGSQLPC RPGELGQQQQ VVNADLTCLI VQLISTAGSL 120 LPSLKNSSFL SHPPAGHTGI VKHVGSSSSF VPNELCSPED YEELFKGFTD GAMEGGIEID 180 NVLVEELDAK DGDEGGDAGM DGEILPPGSY ELLQLEKDEI LAPHTHFCTI CGKGFKRDAN 240 LRMHMRGHGD EYKSPAALAK PPRDTSAEHE VVKRYSCPFV DCKRNKLHKN FQPLKTILCV 300 KNHYKRSHCE KSYTCSRCHT KKFSVMADLK THEKHCGRNK WLCSCGTSFS RKDKLFAHVA 360 LFQGHTPALP TEAKTSSDQI GAVGSHQEPA KLPNSMGSSF MWGTSSGGNS ALDIKGFDGC 420 SDDFLSTVNF GSFNFSFGPA DGFTGEPSGG SFPMMPSEHF QNAQKKGKN*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}. |