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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C00438.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 482aa MW: 52654.9 Da PI: 7.3346 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C00438.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.9 | 6.9e-11 | 177 | 206 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34
k rr+++NReAAr+sR+RKka+i++Le
Pahal.C00438.1 177 KTIRRLAQNREAARKSRLRKKAYIQQLESS 206
6789***********************974 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 482 aa
Download sequence Send
to blast |
MGETSSSTSH SRQDPPLPGY GFHGAIANST PPANFFDQGR GTYFGELEEA LMHQVASLKR 60 TQQAATTSRA HHGDTKPFPT AATATAATAT ARPPTLDIFP AWPMRSAHTP KEGSNLTADS 120 TDDSESSSMN NSNHSSDQLG AAANRARQFD RVSQQQIQHR NMATSSTPKT GKTLDPKTIR 180 RLAQNREAAR KSRLRKKAYI QQLESSKLKL AQMEQDMQRA RSQGLFLGGA PGANTSSGAG 240 MFDVEYARWL DEHGRRMAEL HGALHAQLPD GDLRATVDDT LTHHDELFQL KAVAAKSDVF 300 HLITGVWTTP AERCFLWMGG FRPSDLLRTL LPQLDPLTEQ QLVSICNLQQ SSQQAEEALS 360 QGLEQLHQSL ADTMAGGSLI DDANMSFMGQ MAVALGKLAN LEGFVIQADN LRQQTLHQMH 420 RILTVRQAAR CFLAIGEYHN RLRSLSSLWA SRPREILVGD EGNCGEISIA AQPSQSQFSA 480 F*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF111321 | 0.0 | KF111321.1 Zea mays cultivar B73 basic leucine zipper transcription factor mRNA, complete cds, alternatively spliced. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] - Miyamoto K, et al.
Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]
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