PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.C00221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | NAC | ||||||||
Protein Properties | Length: 422aa MW: 45730.1 Da PI: 7.8875 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 62.4 | 1.4e-19 | 11 | 138 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiykvePwdLpkkvka..eekewyfFskrdkkya....tgkrknratksgyWkatgkd 89 +Gfr +Pt e ++yL + ++g +l+++ i+++d+y +eP +L ++++ ++ + +fF++ + +++ + r++ra+ +g W+++g + Pahal.C00221.1 11 RGFRLNPTPLEAATYYLPQLLAGAPLHEAIrPfIHHADVYACEPGELARQFRPlpRTGHRFFFTHCKLQQPhkagKAGRATRAAGAGSWHSQGVT 105 7************************66544235**************86544433455889999888777733334559999999********96 PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 v ++k+ +vg + L + + g tdW+m+ey+ Pahal.C00221.1 106 DVV-DRKKVKVGEMRKLRYK----KGGAYTDWLMDEYS 138 655.559999*********8....456789*******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-22 | 8 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.233 | 9 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-10 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence Send to blast |
MASLGPEIFS RGFRLNPTPL EAATYYLPQL LAGAPLHEAI RPFIHHADVY ACEPGELARQ 60 FRPLPRTGHR FFFTHCKLQQ PHKAGKAGRA TRAAGAGSWH SQGVTDVVDR KKVKVGEMRK 120 LRYKKGGAYT DWLMDEYSCC LQDAVVGDRQ YVFCNIYASP RAAPGSETRQ ESAAFFATPA 180 PVVIAQAPPP KRLAPQIAEP PCPKRTRGAV VAPVPPVVQP AASCTAYFAP PRPCVPNSAV 240 ALSRLAAPRP CVPNGPSPAS AQPPASAPTR LAALPRRTPA PAPPQPVRQP KQQMPPPIPP 300 VVRACHMPVQ APAQHCRPQP SAQTKKKTRD PFEAAEPRER DEAEEERVAA FDLPSEESPA 360 ALQDDDFDED DLAKAMEEAV KTAEAEEEAA GNSTMTDDEM EQHIFSLLGN DTVIVPKEEK 420 K* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025827463.1 | 1e-166 | atherin-like | ||||
TrEMBL | A0A2T7E4X5 | 0.0 | A0A2T7E4X5_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ha01903.1.p | 1e-166 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1832 | 27 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 2e-08 | NAC domain containing protein 57 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.C00221.1 |