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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.C00012.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 246aa MW: 26534.4 Da PI: 5.4221 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C00012.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.9 | 1.5e-19 | 72 | 121 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +g+++AeIrdp + kr++lg+f+taeeAa+ ++aa+ +l+g
Pahal.C00012.1 72 QFRGVRHRP-WGKFAAEIRDP-----NvgKRVWLGTFDTAEEAAAVYDAAAIRLRG 121
69****888.**********9.....445*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MDAPGRVVRA HFADAVDATD SDSDDGRRRI VRVIDLLPPS ARAAPQRKKL VHYPSNDRPG 60 GERQGQGRGR RQFRGVRHRP WGKFAAEIRD PNVGKRVWLG TFDTAEEAAA VYDAAAIRLR 120 GRRAVTNFPL PSSSATLSSC AVSPAPSPMT STTIIPTTPP VGSSEAESSS ASPPSTQSSS 180 VVDADEDVTR MRWCEDEPFE SIEFYLPPVP TGGQCEFGDL GDLDDLFSPE PEPASRNFPG 240 GNFRL*
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