 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.B05023.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 262aa MW: 28773.7 Da PI: 10.4804 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B05023.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 52 | 1.5e-16 | 172 | 217 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
+r++r++kNRe+A rsR+R++a++ eLe+kv+ Le+eNk+L+ el++
Pahal.B05023.1 172 RRQKRMIKNRESAARSRARRQAYTNELENKVARLEEENKRLR-ELKM 217
79****************************************.6665 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MGVQTMSSHG DDGRRGLSRQ GSVYSLTLTE VETQLGEPLR SMNLDDLLRT VLPAGPATEP 60
APAAKKTVDE VWRDIQSASG ARQPTMGEMT LEDFLSRAGV TVDAGCAGPH WLHQYPPQQQ 120
YVVPRPLPLG SGAGPAVDGV GVGVFLSQVA GRKRGATAAV GGDGVVERTV ERRQKRMIKN 180
RESAARSRAR RQAYTNELEN KVARLEEENK RLRELKMLPP LELPPEHERR PVPQPPPVHE 240
RWPVPRPEAK QPLRRRNSAT F*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 151 | 174 | RKRGATAAVGGDGVVERTVERRQK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT033247 | 1e-149 | BT033247.1 Zea mays full-length cDNA clone ZM_BFb0124H20 mRNA, complete cds. |
| GenBank | BT055475 | 1e-149 | BT055475.1 Zea mays full-length cDNA clone ZM_BFb0325H08 mRNA, complete cds. |
| GenBank | KJ728208 | 1e-149 | KJ728208.1 Zea mays clone pUT6484 bZIP transcription factor (bZIP92) mRNA, partial cds. |
