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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.B04694.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 328aa MW: 36561.3 Da PI: 4.6766 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.B04694.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.9 | 6e-19 | 100 | 150 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa+a++ +++++g
Pahal.B04694.1 100 TQYRGIRRRP-WGKWAAEIRDPQ----KgVRVWLGTFSTAEEAARAYDVEALRIRG 150
58********.**********94....35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0034059 | Biological Process | response to anoxia |
GO:0071456 | Biological Process | cellular response to hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MCGGAILSDL YSPVRWTVTA GDLWGESGSS KNGKSWKRRS SWKFDEDDDD FEADFEDFED 60 CSSEEEVDFG HEEKEFQMNS SNFVEFNGHS AKVASRERKT QYRGIRRRPW GKWAAEIRDP 120 QKGVRVWLGT FSTAEEAARA YDVEALRIRG KKAKVNFPNT ITAAGKHHRR RVARPAKRIM 180 SQESLKSSNA SGQVVSAGSS TDGTVVKIEL LEPPASPLPV SSSWLDAFEL NQLGGLRHLE 240 ADGRETTEET DHETGVTADM VFGDGEVRLA DDFASYEPYP NFMQLPYLEG SSYENIDALF 300 NGKAAQDCVN IGGLWNFDDL PMDRGVY*
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