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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.B04397.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
YABBY |
| Protein Properties |
Length: 166aa MW: 17564.1 Da PI: 7.684 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B04397.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 134.9 | 1e-41 | 15 | 162 | 7 | 168 |
YABBY 7 seqvCyvqCnfCntilavsvPsts...lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98
+e++ vqCnfC til+v vP +k+v+v+CG C +lsv+l + + ++e l+es+ v+ +s +++ e +t
Pahal.B04397.1 15 PERLGCVQCNFCATILLVGVPCCGgglQLKTVAVQCGSCGGILSVTLPPSPPAASVELPLQESG---------VDPPPRHSDESSGEDRETAA-- 98
799999***************97533379*****************999887777666544443.........33322222222222222222.. PP
YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168
e++ p vi+PPe++qr Psayn+fikeei+rika++P+i+h+eafsaa+knWah+P+i
Pahal.B04397.1 99 ---AVAENHAF---PAVIKPPERKQRTPSAYNCFIKEEIRRIKATDPNITHKEAFSAASKNWAHLPRIQQ 162
...22334444...579**************************************************975 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 166 aa
Download sequence Send
to blast |
MASAARHPCF GGLLPERLGC VQCNFCATIL LVGVPCCGGG LQLKTVAVQC GSCGGILSVT 60
LPPSPPAASV ELPLQESGVD PPPRHSDESS GEDRETAAAV AENHAFPAVI KPPERKQRTP 120
SAYNCFIKEE IRRIKATDPN ITHKEAFSAA SKNWAHLPRI QQKEN*
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