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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.B03653.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 133aa MW: 14689.7 Da PI: 11.3194 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.B03653.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.2 | 4.9e-14 | 31 | 71 | 1 | 45 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45
+ y+GVr++ +g Wv+eIr+p++ + r++lg+f ta++Aa++
Pahal.B03653.1 31 PSYRGVRRRG-WGVWVSEIREPRK---KSRIWLGTFATAKMAARL 71
57*****998.**********843...6***************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 133 aa
Download sequence Send
to blast |
MARSSHQLAP GEAGDQEGHA AGRRSGAGRH PSYRGVRRRG WGVWVSEIRE PRKKSRIWLG 60 TFATAKMAAR LNFPHLAHEL PRPASPPPPT SGPPPRSWRQ QCWDDIWLQR GQCASGPPEH 120 LPDLLLDLKD GL*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ307662 | 1e-43 | AJ307662.1 Oryza sativa genomic DNA fragment, chromosome 2. |
GenBank | AP005006 | 1e-43 | AP005006.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0519E06. |
GenBank | AP014958 | 1e-43 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | AY345232 | 1e-43 | AY345232.1 Oryza sativa transcription factor Rap212 mRNA, complete cds. |