 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.B02899.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
C2H2 |
| Protein Properties |
Length: 177aa MW: 18463.5 Da PI: 6.0102 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B02899.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16 | 3.4e-05 | 78 | 100 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F ++ L H++ H
Pahal.B02899.1 78 FSCTYCDKKFYSSQALGGHQNAH 100
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MEQHNSTLII PPSRSETTAP PILSPPWGRL QLCPAVLSLH AMDPNGEGGG GGGEGGDLDL 60
NLSLQPSLAP EPEPPGYFSC TYCDKKFYSS QALGGHQNAH KFERSVAKRA RELAAARRPA 120
GHGRERGGAA DEEVGRGKEL GIAAQGSAAS SSTQQIGAAP EARRDLTDEI DLSLKL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU968700 | 8e-61 | EU968700.1 Zea mays clone 323547 zinc finger protein 2 mRNA, complete cds. |
