PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.B02579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | GeBP | ||||||||
Protein Properties | Length: 234aa MW: 25261.6 Da PI: 12.0054 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 31 | 7.2e-10 | 130 | 224 | 5 | 96 |
DUF573 5 rlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskeh.dqkifelskkiW 96 w +De ++L + ++ +g+ + + ++ + + v +ql++Ki +LK Kfkk v+k a++g + + ++ h + +e+s+++W Pahal.B02579.1 130 NKWCLDDERLILDTMAFLRMGKGSyNKVPKAPEVLRHLVTLRRRGVDVRQLSDKISQLKVKFKKTVAKaAANGGKLRRRTRHrHKVLYEISQQVW 224 56999************999999756666777777777777777899*******************9985555555555555055679******* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.1E-8 | 131 | 224 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MAPTIPPSFP ASRRGKSAAA PTITISSGSD VSVRRTPVIN VSSSSSDDEV TSRPRSAARR 60 ATPPSSVSVV RSPRASSNRG GGGKGDEATS QPRRAARRPS SPASPAVSDR SSDSGGSRSE 120 ATSSQPKKKN KWCLDDERLI LDTMAFLRMG KGSYNKVPKA PEVLRHLVTL RRRGVDVRQL 180 SDKISQLKVK FKKTVAKAAA NGGKLRRRTR HRHKVLYEIS QQVWPHLYQD AGL* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2S3I4Y2 | 1e-164 | A0A2S3I4Y2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J18151.1.p | 4e-67 | (Panicum virgatum) |
Link Out ? help Back to Top | |
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Phytozome | Pahal.B02579.1 |