 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.B02226.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 160aa MW: 17751.8 Da PI: 8.6467 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B02226.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 46 | 1.2e-14 | 29 | 75 | 3 | 49 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
e++r rrk++NRe+ArrsR+RK++ ++ L+ vk+Le +Nk+L l
Pahal.B02226.1 29 ERRRKRRKESNRESARRSRLRKQQHLDDLTSQVKQLEDQNKQLSLAL 75
789***************************************98544 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 160 aa
Download sequence Send
to blast |
MSSGTSSGSS LGTRSSRSED DLDLQAQMER RRKRRKESNR ESARRSRLRK QQHLDDLTSQ 60
VKQLEDQNKQ LSLALSITSQ NLVAVQAQNS VLQTQKMELD SRLSALTEIL CYMNTITCTS 120
ASAPANPAMV NNITSSSSYD LLGASCTWNQ QPIDLYQCF*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 29 | 35 | RRRKRRK |
| 2 | 29 | 36 | RRRKRRKE |
| 3 | 31 | 36 | RKRRKE |
| 4 | 43 | 49 | RRSRLRK |
| 5 | 43 | 50 | RRSRLRKQ |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT067053 | 1e-102 | BT067053.1 Zea mays full-length cDNA clone ZM_BFb0173J02 mRNA, complete cds. |
| GenBank | KJ727558 | 1e-102 | KJ727558.1 Zea mays clone pUT5418 bZIP transcription factor (bZIP9) mRNA, partial cds. |
