 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.B01402.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 409aa MW: 41980.2 Da PI: 7.6813 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B01402.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 75.4 | 7.8e-24 | 280 | 342 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+ L++eN+aL+ el++lkk ++ +++e+
Pahal.B01402.1 280 ERELKRERRKQSNRESARRSRLRKQQECEELARKVADLTTENSALRAELDNLKKACQDMEAEN 342
89*********************************************************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MASSSDEQPK PPEPPAAAAG AVVATAAPPQ SHAEWAASLQ AYYAAAGHPY AWPAQHLMAA 60
AAAGAPFGTP VPFPVYHPGA AAAYYAHASM AAGVPYPTAE AAAAAAAAAA AATAAEGKGK 120
GKGGGASPEK GSSGAPSGED ASRSGDSGSE ESSGTRDDDT DHRDSSASKK RKSGNTSAEA 180
FSAGKEWAIK DCCLPGEPSQ AAVVRYAAVE SPYPAAKGRS ASKLPVSAPG RAALPNATPN 240
LNIGMDLWSA SPALAVPAVQ GEANPGLALA RRDSVTQLDE RELKRERRKQ SNRESARRSR 300
LRKQQECEEL ARKVADLTTE NSALRAELDN LKKACQDMEA ENSRLLRGLV KGGVAHSQGP 360
SVTTTLGMSI DPPKVQHHDD EGQLHKNTSN NSNGNYAGTS HKPEANTR*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 296 | 302 | RRSRLRK |
| 2 | 296 | 303 | RRSRLRKQ |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU970243 | 1e-180 | EU970243.1 Zea mays clone 342575 DNA-binding protein EMBP-1 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-21 | basic region/leucine zipper transcription factor 16 |
