 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.B00752.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
C2H2 |
| Protein Properties |
Length: 146aa MW: 15921 Da PI: 6.9465 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.B00752.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.6 | 0.0002 | 37 | 57 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23
C++C++ F ++ L H++ H
Pahal.B00752.1 37 CTYCDRKFYTSQALGGHQNAH 57
******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MKTPEQELDL ELSLILHRPP SPPELEPVEE PVGFFLCTYC DRKFYTSQAL GGHQNAHKYE 60
RALAKRRRKI AAAMRANQAI ERGAGQVDRP GGTGARVVGV AGAEPEAAER ARPLVAQQSA 120
PVPWHSADLQ SDMGRADELD LTLRL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU960065 | 3e-41 | EU960065.1 Zea mays clone 221533 hypothetical protein mRNA, complete cds. |
