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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.A04027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 173aa MW: 18722.1 Da PI: 8.9867 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.7 | 4e-16 | 97 | 152 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 ++ +r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk + ++lk e+a+l Pahal.A04027.1 97 RKNIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRQCKQLKVEMAALI 152 6889*******************************************999998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.3E-16 | 92 | 152 | No hit | No description |
SMART | SM00338 | 1.1E-14 | 93 | 157 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.645 | 95 | 151 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.8E-13 | 97 | 151 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.07E-15 | 97 | 151 | No hit | No description |
SuperFamily | SSF57959 | 5.31E-12 | 97 | 152 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MPRSPQLSLS GCSSLFSLSS TSTSRDNDSA AAAPVPPPPP SLHPLPPRRP LLSLSVGGGA 60 EEEQEEEEEY LLGGLDLHLT GAGGSNSSGC CDGDDERKNI RMMKNRESAL RSRARKRAYV 120 QELEKEVRRL VNENLKLKRQ CKQLKVEMAA LIQPSSSKSN SHIRRAASST QL* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025812916.1 | 1e-120 | bZIP transcription factor 27-like | ||||
Refseq | XP_025812921.1 | 1e-120 | bZIP transcription factor 27-like | ||||
Refseq | XP_025812927.1 | 1e-120 | bZIP transcription factor 27-like | ||||
TrEMBL | A0A2S3GV62 | 1e-119 | A0A2S3GV62_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J00689.1.p | 5e-70 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4017 | 30 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 7e-14 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pahal.A04027.1 |