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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A03463.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 257aa MW: 26654.8 Da PI: 6.5099 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A03463.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 7.1e-20 | 117 | 167 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GVr+++ +g+W+AeIrdp + r +lg+f+tae+Aa+a++ a+ +++g
Pahal.A03463.1 117 SKYRGVRRRP-WGKWAAEIRDP-----HraVRKWLGTFDTAEDAARAYDVAAVEFRG 167
89********.**********7.....338***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MAPRLERGGF QLPNAEQENS LLLRALISVV SGDNAVPALE PEEAPPAVAA AAPAPAPAPS 60 PAVACAGCGA DGCAAGCELL AAAGTGSSSD SEDGGECSAS RAVTGGVGKR RRRMRVSKYR 120 GVRRRPWGKW AAEIRDPHRA VRKWLGTFDT AEDAARAYDV AAVEFRGQRA KLNFPAAQAA 180 AVAPAPASSW APTSTYHHLT PQPLPESLHE NCGSNAASPA PAGQQGTRSA AKEQDIWDGL 240 NEIMMMDDGS FWSSMP*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 108 | 124 | KRRRRMRVSKYRGVRRR |
2 | 109 | 125 | RRRRMRVSKYRGVRRRP |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU974975 | 3e-76 | EU974975.1 Zea mays clone 461977 ethylene-responsive element binding protein 2 mRNA, complete cds. |