 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.A03226.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
NF-YB |
| Protein Properties |
Length: 219aa MW: 23286.4 Da PI: 9.1293 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A03226.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 108.5 | 4.3e-34 | 54 | 140 | 7 | 93 |
NF-YB 7 flPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
lP+an++r+m++v+P+ k+s ak+++++c++ef++fv++eas+++++++r+ i+++d+ a+ tlG++dyvep+++y+++yre
Pahal.A03226.1 54 GLPMANLVRLMRQVIPKGVKVSTRAKHLTHDCAVEFVGFVAGEASEQARAQHRRIISPEDFTRAFQTLGLDDYVEPMSTYIRRYREH 140
69***********************************************************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MALPTKFHKI ERMGRKAKRG GAKKGVRDAE KTKVAPADCA SPDGEGGSAS AAAGLPMANL 60
VRLMRQVIPK GVKVSTRAKH LTHDCAVEFV GFVAGEASEQ ARAQHRRIIS PEDFTRAFQT 120
LGLDDYVEPM STYIRRYREH HNIAAGYGGF VTRAPPVAAT AAAAPVTAPG VPCFSDEEMQ 180
HLSSMVLPPA HGEHDGEGSS SAYTPTPAGR CYSYTGYM*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC243257 | 0.0 | AC243257.1 Panicum virgatum clone PV_ABa103-H05, complete sequence. |
