 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.A03010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
MYB |
| Protein Properties |
Length: 357aa MW: 37815 Da PI: 4.2336 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A03010.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 50.8 | 3.8e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT++Ed +l +++++G +W++ ++ g+ R++k+c++rw +yl
Pahal.A03010.1 16 RGSWTPQEDMRLMAYIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63
89******************************99************97 PP
|
| 2 | Myb_DNA-binding | 51.1 | 3.2e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++l
Pahal.A03010.1 69 RGNFTVEEEETIIRLHGMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114
89********************.*********.************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MGRGRAPCCA KVGLNRGSWT PQEDMRLMAY IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI 60
NYLRPDLKRG NFTVEEEETI IRLHGMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKKAAL 120
REQQKAGAAK NDGAASGGDA GTPVTDSSSA SSSTTTTNSS SGGSDSGDQC DTSKEPDAVP 180
VSPLQLEDVD VSEMLVDAPA AAQPMLSASC SSSSLTTCAG GVEDLIELPV IDIEPDIWSI 240
IDGECADASG ARRGDATAPC TGAAVSTSEA GEAANDWWLE NLEKELGLWG PAEDPQAQTD 300
LLDHTGFGPL VDSEGDPVST YFQTGPDNAA AELLLDVELE LELELEPEPE PSALLL*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that regulates positively genes involved in anthocyanin biosynthesis such as A1. {ECO:0000269|PubMed:7920701}. |
