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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A02894.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
Dof |
Protein Properties |
Length: 352aa MW: 36489.6 Da PI: 8.7318 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A02894.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.2 | 2.1e-39 | 59 | 120 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
Pahal.A02894.1 59 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 120
7899******************************************************9875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MEEETREGGS NSIRAIHRAF LLIPRPSHPN EESLARSAIG ILACMDAAQW HQRRARPQKE 60 KALNCPRCNS TNTKFCYYNN YSLQQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS 120 AVSSAAAAAA STSAAVSGTI PVGLAAKNPK LMHEGAHDLN LAFPHHNGRG LQPPDFAAFP 180 SLESSSVCNP GATMAGNGAA GRGVGALSAM ELLRSTGCYV PLQHVQLGMP AEYAAAGFAL 240 GDFRMPPPPQ SHQSVLGFSL DTHGTGAGGY SAGLQESAAG RLLFPFEDLK PAVSAAAGAA 300 HNNGAGQYEH SKDQAGDGSG ASGVTGGHET PGFWSNSILG NGSSNGGGGP W*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC582410 | 0.0 | KC582410.1 Sorghum bicolor dof16 protein (dof16) gene, partial cds. |