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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A02790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 318aa MW: 33761.8 Da PI: 6.404 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A02790.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 137 | 188 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+++g r++lg+++ta eAa+a+++a+ +++g+
Pahal.A02790.1 137 KYRGVRQRP-WGKFAAEIRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 188
8********.***********8876..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MDFSGEIDDF NMQFIREQLL GGEACLPVVN VPGAAAYSAP SVHPAAQAAF QHPAAFVPQP 60 QHLHQAAYVD LTNEYADAAA AVAEAAFRAE PVMIRFGGEP SPVSDPGRRP LLTISLPPTS 120 HAWGPAAAAM DANDFRKYRG VRQRPWGKFA AEIRDPKKRG SRVWLGTYDT AIEAARAYDR 180 AAFRMRGAKA ILNFPNEVGS RGADFLAPPP PPPQSSQQNK RKLAHDAAEA EPAAKSVKAE 240 AFGSPASSLT SSLSPATTTA STVTATSSPS SEAGATEMFP FSMTPSSWTW EQLEGFFGSL 300 SPLSPHPQLG FPEVTVN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT084056 | 1e-121 | BT084056.1 Zea mays full-length cDNA clone ZM_BFb0069B11 mRNA, complete cds. |