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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A02700.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 459aa MW: 48674.3 Da PI: 9.5938 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A02700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.2 | 4.7e-19 | 215 | 265 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge
Pahal.A02700.1 215 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 265
59******9.**********955...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MEPADRGGGG RGLGLGRGRG WKGKAVTSGG PAAGRQLAPV LEDTPAAALL RPLKKIRSPD 60 RRFHRSLSTL SSPAPASPDS SSVSNPVSPP ATPLPSTRHV FPFAYDTAPA ASAPSVPPLL 120 QYSSVYQQPQ QQPLQHQQMI SFGGSQQQQQ PPPPQFGAAA SPLFPPQLVA PEVQPQMLLR 180 YWSEALNLSP RGFRGGAVPP ALYQQLLRSA GPPKLYRGVR QRHWGKWVAE IRLPRNRTRL 240 WLGTFDTAED AAMAYDREAF KLRGENAKLN FPDLFLGKGR VGGSGRTSAS AAASCSSSSS 300 SAPPTPDETN AKQAQQHHGE QPPSNSEGKP LLPETEQAKN SEPEPNPQLQ PTDHQGGDGN 360 AAVFQPSATS GGVWVPADEA WFSAWGPGSS VWDYDMDNAH GLFLQSRFAS EATSMDYAAS 420 APDVPATPAA GTAMASAASI SFPPPPPPPR SPAYMWKD*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727674 | 0.0 | KJ727674.1 Zea mays clone pUT5601 AP2-EREBP transcription factor (EREB76) gene, partial cds. |