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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A02066.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 243aa MW: 25765.1 Da PI: 10.8047 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A02066.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.4e-20 | 126 | 174 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+W+AeIrdp+ + +r++lg+f t+e+Aa+a++ a+++l+g
Pahal.A02066.1 126 YRGVRRRP-WGKWAAEIRDPK----KaARVWLGTFATPEDAARAYDGAALRLHG 174
9*******.**********94....45*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MRPPPSSPAP ASLLEAAEEA IIVAALTHVL ANGRGATLTP HAPSPVVPPC PWTATGCHRG 60 HVGQAACRGE PSPSAHIVSA RDRSACEQGL MAASATHELA PMASAWPQEA QRGAAAAAAS 120 SRRRSYRGVR RRPWGKWAAE IRDPKKAARV WLGTFATPED AARAYDGAAL RLHGSRAKLN 180 FPEDASSLRH PPAPVGSRQP GSGWDRTLDR SACPEMVKRR DNGRFLGYWS IGTWSPSPKP 240 TC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP091407 | 1e-47 | FP091407.1 Phyllostachys edulis cDNA clone: bphyem102c19, full insert sequence. |