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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.A01065.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
C2H2 |
Protein Properties |
Length: 384aa MW: 41663.6 Da PI: 6.0962 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.A01065.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 23.5 | 1.5e-07 | 145 | 167 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ Cgk F+r nL+ H+r H
Pahal.A01065.1 145 HTCKVCGKGFKRDANLRMHMRGH 167
79*******************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MEVWNNVESS MEAHRELHDH SQAGGSDSDD PRTVLTYLTF LEQKIAHLRG IICSAPRPPR 60 QIVSAELSCI AVQLVSISNT LAAASGATAE EEAKSPPRAA TPSEGDSDSS DHDLHAEDDD 120 ERLPPAGSYE VIELDKEEIL APHVHTCKVC GKGFKRDANL RMHMRGHGEE YKTAAALAKP 180 GRDAPPLPPA RCFYSCPFVG CKRNREHKSF QPLKTAVCVK NHYRRSHCDK SYTCRRCNVK 240 RFSVLADLRT HEKHCGRDRW VCSCGTSFSR KDKLFGHVAA FDGHAPALPP EEDDAAGHSA 300 ANGLGSASDQ VLMDTEAVGR MANHKECFSG SIFDGLSCSD IKGFAMIDGQ CLDNGGGSLS 360 PMDLYSCDLD GFDLFGAPGI DDF*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012611 | 1e-131 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |