 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.A00620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 159aa MW: 17907.1 Da PI: 8.2323 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A00620.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 40.4 | 6.5e-13 | 68 | 114 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
++ rr+++NRe+ArrsR RK+ +++ L v+eL N++L el++
Pahal.A00620.1 68 RKKRRLASNRESARRSRVRKQRRLDDLSSQVAELLDTNQRLLIELNH 114
7899**************************************99886 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MQQNCVANLA CLPGLDFTSF FLPQNDLHIY DVNPLGMVGP YNYNGSTTIS SMSAGTADNQ 60
DRRNNDERKK RRLASNRESA RRSRVRKQRR LDDLSSQVAE LLDTNQRLLI ELNHMIARHS 120
RVVRENAKLR EEAAALQKRL NEMEVEEAEA APGTPEVA*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 80 | 86 | RRSRVRK |
| 2 | 80 | 87 | RRSRVRKQ |
