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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.A00482.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 308aa MW: 32510.1 Da PI: 5.1855 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A00482.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 53.1 | 6.8e-17 | 134 | 186 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
++kr rr+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l + ++
Pahal.A00482.1 134 DVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDAN---QQ 186
68***************************************9996555444...43 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MKKCASELEL EAFIDAAAAA EHKPGHDIAA QAAFAAGVFS PGDLSGFSFA DSNTLNGSIP 60
NHLWSHNHNV RHPAVSTTIE SQSSICAAAS PTSATNLYLK ESQTLGGTSG SDSDSESLLD 120
IEGGPCEQST NPQDVKRMRR MVSNRESARR SRKRKQAHLA DLETQVDQLR GENASLFKQL 180
TDANQQFTTA VTDNRILKSD VEALRVKVKL AEDMVARGAL SCGLGSLGLS PVLNPRQACR 240
GPDVLSGLDF AGDGACFAGL SPTEQVQNSP LQSIASLESL ENRMNSEVTS CGGPGVDVWP 300
WDGGLSK*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 148 | 154 | RRSRKRK |
| 2 | 148 | 155 | RRSRKRKQ |
| 3 | 150 | 155 | SRKRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT034689 | 0.0 | BT034689.1 Zea mays full-length cDNA clone ZM_BFb0011L11 mRNA, complete cds. |
| GenBank | JX469922 | 0.0 | JX469922.1 Zea mays subsp. mays clone UT3178 bZIP-type transcription factor mRNA, partial cds. |
| Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
J. Biol. Chem., 2001. 276(17): p. 14139-52
[PMID:11133985] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764]
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