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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.A00166.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
bZIP |
| Protein Properties |
Length: 362aa MW: 38358.8 Da PI: 5.2314 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.A00166.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 68.4 | 1.1e-21 | 257 | 319 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
Pahal.A00166.1 257 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAEALRSENSSLRAELERIRKEYEQLLSQN 319
89**********************************************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MGSNDPSTPS KAPKASEQDQ PSATTSGAPA SVYPEWPSFQ AYSAIPPHGF FPPTVAANPQ 60
AHPYMWGAQH MVPPYGTPPS PYVVYPPGTV YAHPSTPPGM HPFSHYSMPT NGHAETPGAA 120
PSAPEMNGKN EPGRMSAPSA NGITSHSESG SESESEGSDA NSQNDSQSKD NDGKEDGVFC 180
QYAGSSQNGI SYSVSQGMLN QTMPMVPIQP GAMVGVPGST ANLNIGMDYW AAPGSATVPA 240
TQGKATSGSA RGDQWDEREL KKQKRKQSNR ESARRSRLRK QAECEELGQR AEALRSENSS 300
LRAELERIRK EYEQLLSQNA SLKEKLGATS DSIPDMNEQN DGGGSGYKKQ PDSDAQPGNE 360
S*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 273 | 279 | RRSRLRK |
| 2 | 273 | 280 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT1G32150.1 | 7e-89 | basic region/leucine zipper transcription factor 68 |
| Publications
? help Back to Top |
- Tabata T,Nakayama T,Mikami K,Iwabuchi M
HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
EMBO J., 1991. 10(6): p. 1459-67
[PMID:2026143] - Tabata T, et al.
A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif.
Science, 1989. 245(4921): p. 965-7
[PMID:2772648] - Mikami K, et al.
Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants.
Mol. Gen. Genet., 1995. 248(5): p. 573-82
[PMID:7476857] - Nakayama T,Okanami M,Meshi T,Iwabuchi M
Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain.
Mol. Gen. Genet., 1997. 253(5): p. 553-61
[PMID:9065688] - Okanami M,Meshi T,Tamai H,Iwabuchi M
HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain.
Genes Cells, 1996. 1(1): p. 87-99
[PMID:9078369]
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