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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PSME_00056855-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
ERF |
| Protein Properties |
Length: 265aa MW: 29773.3 Da PI: 5.2251 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00056855-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.3 | 4.6e-19 | 40 | 88 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+Wv+eIr p g ++r++lg+++ +e+Aa+a++ a+++l+g
PSME_00056855-RA 40 YRGVRRRR-WGKWVSEIRQP---GTKTRIWLGSYDEPEMAARAYDVAALCLKG 88
9****777.**********8...325*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MDSCSNMVDC NTRKRNRAGE KETRNPMYRG GEKETKNPMY RGVRRRRWGK WVSEIRQPGT 60
KTRIWLGSYD EPEMAARAYD VAALCLKGKL ALPNFPHLIH TLPRPASLDP IDIQYAAAKA 120
ADLAIRQQSH PEITTAAVEF PNVGGSIEAA AATVVADKSR ESAQMNFDVE EAPDHAAANF 180
SYCRYEIDDG GEGSLVNLRI RTGRTDQCSS SLFDEEMQQF NSPNLVMNMA EALLLTPPRL 240
NEQHETDDYY GLDQTAAFEF LWTSF
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