PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00056019-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family BES1
Protein Properties Length: 404aa    MW: 45274.6 Da    PI: 8.2654
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00056019-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822134.21.4e-41521665117
            DUF822   5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas.aspesslq 95 
                       r+p++ ErE+n+rRER RR +aaki+aGLRa+Gny+lpk+aD neVlkALc+eAGw v++DGt yrk    +   +  a++s    + +ss  
  PSME_00056019-RA  52 RNPSANEREKNRRRERMRRSVAAKIFAGLRAHGNYRLPKHADHNEVLKALCNEAGWHVQEDGTIYRKNRAEMkGPSLLAVESPGkGTSCSSNY 144
                       89****************************************************************998888544444444444244444443 PP

            DUF822  96 sslkssalaspvesysaspkss 117
                        +  +++  s ++s  +s ++ 
  PSME_00056019-RA 145 AEQGNNTAWSAITSNVPSSRAF 166
                       3444444444444444444443 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.3E-3952167IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MGWEGVQEEA MRSRSSSSSK GFAGRGCIKT TSGPWVVRRA SSKWGCETLL LRNPSANERE  60
KNRRRERMRR SVAAKIFAGL RAHGNYRLPK HADHNEVLKA LCNEAGWHVQ EDGTIYRKNR  120
AEMKGPSLLA VESPGKGTSC SSNYAEQGNN TAWSAITSNV PSSRAFEFLP EGSYENGFES  180
LSKTYGDHEN HNETSLAPII MNNKYPLHES SCMPTYDSYK SAGSLKMMKG IDLQLSVIDS  240
HGQSLVELRD RGLQLGFCNE HVEYSRRQGL RPLIPEEPDI AALSSSPEPI NAQTNLSIQY  300
GEQNLKWMVV TDQNKQGSQR FGFQWTEERS HKHLSHDDIS QFEGNNTRRE IPTVINFFCC  360
NEPQNPTVIR KCEWTNAQDV DGLALSLCSA SSLQRAKQSV KVTV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-1652125372445Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-1652125372445Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-1652125372445Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-1652125372445Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.63e-20BES1 family protein