 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PSME_00054525-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
WOX |
| Protein Properties |
Length: 66aa MW: 7336.2 Da PI: 4.8547 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00054525-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 30.3 | 7.1e-10 | 25 | 61 | 3 | 38 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCT CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkklg 38
+R+++t++++++L+el++ r+p+ e++++++++l+
PSME_00054525-RA 25 SRWNPTADEVTILKELYRGgMRTPTSEQIQQISSQLR 61
7*****************99***************95 PP
|
| 2 | Wus_type_Homeobox | 59.2 | 9.8e-20 | 24 | 66 | 3 | 45 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGki 45
+RW+Pt++ ++iL+ely+ G+rtP++e+iq+i+++L+ yGki
PSME_00054525-RA 24 GSRWNPTADEVTILKELYRGGMRTPTSEQIQQISSQLRCYGKI 66
68***************************************98 PP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX411949 | 2e-59 | JX411949.1 Picea abies WUSCHEL homeobox protein WOX5 (WOX5) gene, complete cds. |
