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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00053420-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 314aa MW: 36363.3 Da PI: 5.4223 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00053420-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 134.1 | 9.3e-42 | 20 | 146 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
pGfrF Pt+eel+++yLkk+v+g + l+l+ +i++v++y+++Pw+Lp ++ +e++w+fF++rd++++ r++r+t sgyWkatg+d++v
PSME_00053420-RA 20 PGFRFYPTEEELLSFYLKKRVTGCDqLNLDIIIPTVQLYHYDPWELPgFVHYVGERQWFFFVPRDHNKS-CPRPSRMTVSGYWKATGSDRAVR 111
9********************99875777667***************666777999*********9876.68********************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + +glkk+Lvfykg+ap++++tdW+m+eyr+
PSME_00053420-RA 112 NELLQCIGLKKILVFYKGKAPRSQRTDWIMNEYRM 146
*99999***************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MQEEIYNDWK VKGEEIMDLP GFRFYPTEEE LLSFYLKKRV TGCDQLNLDI IIPTVQLYHY 60 DPWELPGFVH YVGERQWFFF VPRDHNKSCP RPSRMTVSGY WKATGSDRAV RNELLQCIGL 120 KKILVFYKGK APRSQRTDWI MNEYRMPYSR LSAPKKTDIV LCRIYRKAAS NKSMEHPATQ 180 DYLDKEEPVV SGYNYGEKSH SVTLDHHDSY QLSNPVEKSD VFSLHYNVDD EGVGSSDPGK 240 SNVKEDSFFD CLEPIMEPII CSEETTVLKT LTACNPAQLE LPKLSMDSWL SQPISTYSLL 300 PTPLPIDFPT DHMF
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 4e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 3e-41 | 20 | 170 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 3e-41 | 20 | 170 | 19 | 168 | NAC domain-containing protein 19 |
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