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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00053123-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 442aa MW: 49582.4 Da PI: 5.7742 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00053123-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 179.6 | 8.1e-56 | 20 | 148 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhP deelv++yL++kv ++++++ ++++evd++k+ePwdLp k+k +ekewyfFs rd+ky+tg+r+nrat++gyWkatgkd+e++
PSME_00053123-RA 20 LPPGFRFHPMDEELVTYYLTQKVLDSSFNC-RAVAEVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGTRTNRATEAGYWKATGKDREIY 111
79****************************.88***************99999**************************************** PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
+ ++ lvg+kktLvfykgrapkgekt+Wvmheyrle
PSME_00053123-RA 112 RGkTNILVGMKKTLVFYKGRAPKGEKTSWVMHEYRLE 148
9645556****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 442 aa
Download sequence Send
to blast |
MEEANVNSKQ QMNKMDDEIL PPGFRFHPMD EELVTYYLTQ KVLDSSFNCR AVAEVDLNKC 60 EPWDLPGKAK MGEKEWYFFS LRDRKYPTGT RTNRATEAGY WKATGKDREI YRGKTNILVG 120 MKKTLVFYKG RAPKGEKTSW VMHEYRLEGK FLYYDLPKTA KDEWIVARIF QKSSGAKKGP 180 LGLGRSSSFL NDLDSPNLPP LSDSPYIPNS MGGGLSFESE SAGSAMDSQQ PVNCFSIQGY 240 TNDNQGFRMP PNQALQNLGS ISSDTVDFQY IQNMLMGMNA NSSPTQMQPQ MPNYPQLPTY 300 SMGPNSNFPI YSNPHYPSGS HPNSYILKAQ SDIANERFKQ CKMEPPSPFN ASGTLKNLPV 360 QPGSSQWIST SGGYQQQNQD NLEPKYGVPQ QQMQNPAMVS LSQETGLSSE INADMSSVVS 420 SQPSQQYHEE GTDMESLWNS LS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-51 | 10 | 178 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-51 | 10 | 178 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-51 | 10 | 178 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-51 | 10 | 178 | 7 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 4e-51 | 10 | 178 | 7 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-51 | 10 | 178 | 7 | 171 | NAC domain-containing protein 19 |
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