 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PSME_00052781-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
MYB_related |
| Protein Properties |
Length: 219aa MW: 24613.1 Da PI: 11.4343 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00052781-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 21.4 | 5.9e-07 | 155 | 181 | 20 | 48 |
TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48
G ++W++Ia ++ +Rt+ ++k++w++++
PSME_00052781-RA 155 GEERWSLIAGLLP-RRTD-EIKNHWNTHM 181
4449*********.****.*******986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MEGKGGREIQ GGRWSYRDRD IYGDMERGER GGEREGGRGI EREGGRGIER EGGRGIEREG 60
GRGIEREGGR GIEREGGRGI EREGGRGIER EGGRGIEREG GRGIERKGGQ NDGGGRQGER 120
ERERRGRGRG RGRGRGRKGG RERNREGGRE RMMEGEERWS LIAGLLPRRT DEIKNHWNTH 180
MKKKLVRRGF EPQSHIPLSQ PNNSNTTYTS VPVAKHEIP
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 126 | 135 | RGRGRGRGRG |
| 2 | 126 | 136 | RGRGRGRGRGR |
