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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PSME_00052199-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
NAC |
| Protein Properties |
Length: 288aa MW: 32414.4 Da PI: 7.7352 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00052199-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 125.1 | 5.9e-39 | 22 | 130 | 1 | 106 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeel+ +yLkkkv+++++++ ++i+e+d+y+++PwdLp+k+ +e+ewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk+++
PSME_00052199-RA 22 LPPGFRFHPTDEELLIHYLKKKVSSSPVPA-SIIAEIDLYQHDPWDLPAKACFGEQEWYFFSPRDRKYPNGERPNRSAGSGYWKATGTDKPIV 113
79***************************9.89***************8777899*************************************9 PP
NAM 94 sk....kgelvglkktL 106
+ ++++vg+kk+L
PSME_00052199-RA 114 ITsestSSQKVGVKKSL 130
9877777788*****98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MKQQSVEGLP LPTFHHQVLP HLPPGFRFHP TDEELLIHYL KKKVSSSPVP ASIIAEIDLY 60
QHDPWDLPAK ACFGEQEWYF FSPRDRKYPN GERPNRSAGS GYWKATGTDK PIVITSESTS 120
SQKVGVKKSL LDDWVLCRIY KKVSQSSPQL EAPSTADVKK KSAMPKFGSF SRLLQSEGPF 180
MESFLSHATS DANAALSHVE PSSTLQVDPQ QLNSSETRSH VSLTMSFNGD EVSSVYPAKR 240
QNTQNSLQFQ SSNPHMTDQQ HMYRLPFNQN WNPELLGWPL PTGNVWCG
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-53 | 22 | 149 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-53 | 22 | 149 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-53 | 22 | 149 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-53 | 22 | 149 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 9e-53 | 22 | 149 | 20 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 8e-53 | 22 | 149 | 17 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 8e-53 | 22 | 149 | 17 | 170 | NAC domain-containing protein 19 |
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