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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00052169-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 221aa MW: 25910.4 Da PI: 7.1774 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00052169-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 133.6 | 1.4e-41 | 20 | 146 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
pGfrF Pt+eel+++yLkk+v+g + l+l+ +i++v++y+++Pw+L ++ +e++w+fF++rd++++ r++r+t sgyWkatg+d++v
PSME_00052169-RA 20 PGFRFYPTEEELLSFYLKKRVTGCDqLNLDIIIPTVQLYHYDPWELAgFVHYVGERQWFFFVPRDHNKS-CPRPSRMTVSGYWKATGSDRAVR 111
9********************99875777667**************9656677999*********9876.68********************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + +glkk+Lvfykg+ap++++tdW+m+eyr+
PSME_00052169-RA 112 NELLQCIGLKKILVFYKGKAPRAQRTDWIMNEYRM 146
*99999***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MQEEIYNDWK VKGEEIMDLP GFRFYPTEEE LLSFYLKKRV TGCDQLNLDI IIPTVQLYHY 60 DPWELAGFVH YVGERQWFFF VPRDHNKSCP RPSRMTVSGY WKATGSDRAV RNELLQCIGL 120 KKILVFYKGK APRAQRTDWI MNEYRMPDSR LSAPKKTDIV LCRIYRKAAS NKSMEHPATQ 180 DYLDKEETVV SGDNYGEKSH SVTLDHHDSY QLSNPVEKSD V
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-41 | 20 | 170 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 2e-41 | 20 | 170 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-41 | 20 | 170 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-41 | 20 | 170 | 19 | 168 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |