 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00052135-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
WOX |
| Protein Properties |
Length: 261aa MW: 29637.1 Da PI: 6.0326 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00052135-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 27.9 | 3.9e-09 | 3 | 48 | 14 | 54 |
HHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
Homeobox 14 eLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
+L Fe+ +ps++e++ + ++l ++++++V++WF Nr+++
PSME_00052135-RA 3 ILIPKFESgMVKPSRHEIKTIIAQLqefgQVEDANVFYWFRNRKYR 48
56667998899*********************************98 PP
|
| 2 | Wus_type_Homeobox | 59.3 | 9.2e-20 | 2 | 48 | 14 | 60 |
Wus_type_Homeobox 14 kiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaR 60
+iL ++sG++ P+++ei+ i a+L+e+G++ed+NVfyWF Nrk R
PSME_00052135-RA 2 RILIPKFESGMVKPSRHEIKTIIAQLQEFGQVEDANVFYWFRNRKYR 48
678888***************************************88 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MRILIPKFES GMVKPSRHEI KTIIAQLQEF GQVEDANVFY WFRNRKYRIF NRVERTEKNT 60
KAIINVANNT ADNSLHNNGE SCSSYVLEDP FFTQDDPFFT HQIDFFTLAN RTLLMIRGTG 120
GSFNYELSIP VLINNIPVEV PMGSINIRDA FRENAVLLHS TGEPVLVKEW GFTPECLQQV 180
TEYYVAVPLY LLELAPTKLH GGLNMMFRLA TTLGIFIENM VNYGIENIKP SGWRLSLGLD 240
AVPAILLKVG GFFLPETPNS L
|
| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| TrEMBL | D5LMH9 | 3e-46 | D5LMH9_PICAB; Putative wuschel homeobox protein WOX8/9 |
