 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00052007-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
WOX |
| Protein Properties |
Length: 256aa MW: 28077.5 Da PI: 7.8051 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00052007-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49.7 | 6.2e-16 | 5 | 65 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R++++++q+++Le l ++ +p +ee++++ +l ++++ +V++WFqNr+a+ k+
PSME_00052007-RA 5 KTRWNPKPDQIKILEGLLNSgMVNPPREEIKRIRGQLekfgHVEDVNVFYWFQNRKARVKR 65
89*****************99*************************************997 PP
|
| 2 | Wus_type_Homeobox | 104.2 | 8.4e-34 | 4 | 66 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
a+tRW+P+p+QikiLe l +sG+++P++eei+ri+ +Le++G++ed NVfyWFQNrkaR ++k
PSME_00052007-RA 4 AKTRWNPKPDQIKILEGLLNSGMVNPPREEIKRIRGQLEKFGHVEDVNVFYWFQNRKARVKRK 66
689**********************************************************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MPVAKTRWNP KPDQIKILEG LLNSGMVNPP REEIKRIRGQ LEKFGHVEDV NVFYWFQNRK 60
ARVKRKRQQQ DAEKSESRAK GARPLSSSSS TSTTSTSTSD LSQPVKIVNQ PHSSSAGPAS 120
SFSGHHCNPQ VNQKISTSQY SNMQPIGAGE ATERRGILNE GGVLEDPINI DNSVITVIVN 180
DISIQVPKDP INLRAFFGDD ALLLHSSGHS VLVNERGFTI QGLEDGASYF LVVEMTLDGI 240
LNHLSTFVNT LGTLDS
|
