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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PSME_00050761-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
ERF |
| Protein Properties |
Length: 210aa MW: 24249.5 Da PI: 8.9034 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00050761-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 57.9 | 2.5e-18 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
+y+GVr+++ +g+Wv+eIr+p +r++lg+f t+e+Aa+a+++a+ +
PSME_00050761-RA 6 KYRGVRQRH-WGSWVSEIRHP-----LlkTRVWLGTFETEEDAARAYDEAAILM 53
8*******9.**********8.....334*********************9866 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0010143 | Biological Process | cutin biosynthetic process |
| GO:0010166 | Biological Process | wax metabolic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MGRPQKYRGV RQRHWGSWVS EIRHPLLKTR VWLGTFETEE DAARAYDEAA ILMCGPHHAK 60
TNFTYDPNAP QSRKPSFLSA ALTAKLRQCY LSSLSIEMQE GTGNKHQLQS PVMTPSLTCL 120
RLDTEKSNLG IWQKRAGKQS RSNWVMTVKF DSFNDRGRRP ALKQETEHDV ALEMIEELLH 180
PTSMEFSSQT DTSYTCVPIN IWNIHYWHTI
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
| Publications
? help Back to Top |
- Taketa S, et al.
Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway.
Proc. Natl. Acad. Sci. U.S.A., 2008. 105(10): p. 4062-7
[PMID:18316719] - Al-Abdallat AM,Al-Debei HS,Ayad JY,Hasan S
Over-expression of SlSHN1 gene improves drought tolerance by increasing cuticular wax accumulation in tomato.
Int J Mol Sci, 2014. 15(11): p. 19499-515
[PMID:25350113] - Djemal R,Khoudi H
Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum).
Protoplasma, 2015. 252(6): p. 1461-73
[PMID:25687296] - Sadler C, et al.
Wax and cutin mutants of Arabidopsis: Quantitative characterization of the cuticular transport barrier in relation to chemical composition.
Biochim. Biophys. Acta, 2016. 1861(9 Pt B): p. 1336-1344
[PMID:26965486] - Sajeevan RS, et al.
Expression of Arabidopsis SHN1 in Indian Mulberry (Morus indica L.) Increases Leaf Surface Wax Content and Reduces Post-harvest Water Loss.
Front Plant Sci, 2017. 8: p. 418
[PMID:28421085]
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