PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00049827-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family BES1
Protein Properties Length: 278aa    MW: 29869.6 Da    PI: 7.2858
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00049827-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822153.31.8e-4719102487
            DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                        r p+wkErEnnk+RERrRRaiaaki++GLR +Gnyklpk++DnneVlkALc+eAGwvve+DG  y+kg++p e ++ +   ++
  PSME_00049827-RA  19 NRLPNWKERENNKKRERRRRAIAAKIFTGLRLYGNYKLPKHCDNNEVLKALCAEAGWVVEEDGSAYKKGMRPSECMNGVSLGNN 102
                       589**********************************************************************77776654444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-4420117IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MLVFSQAKPS QPANMSPVNR LPNWKERENN KKRERRRRAI AAKIFTGLRL YGNYKLPKHC  60
DNNEVLKALC AEAGWVVEED GSAYKKGMRP SECMNGVSLG NNTSCGLSEN GSLIPWLKDL  120
GSSGGSASDG LQSRSCSAPV TPPLSSPTTI NSSSAIPYNI KRECYKDTSD GSQGGFFNSV  180
MWPPIQLPHQ SAFSAFNSQI DPAPLVGISA DEACGIGAVY NDCINNSHLA IGPENNPLQK  240
MTMSSGLSAW EGEKLHDSGR DELELTLGCS SLDAGAKI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-212090372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-212090372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-212090372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-212090372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1119263e-92BT111926.1 Picea glauca clone GQ03307_L18 mRNA sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.18e-32BES1/BZR1 homolog 1