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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00047342-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
WOX |
Protein Properties |
Length: 275aa MW: 30651.5 Da PI: 7.3233 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00047342-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 48.1 | 2e-15 | 33 | 93 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+ ++++q+++Le+ ++ +p +ee++++ +l ++++ +V++WFqNr+a+ k+
PSME_00047342-RA 33 KTRWHPKPDQIQILEAIVNSgMVNPPREEIKRIRGQLeefgHVEDVNVFYWFQNRKARVKR 93
89*****************99*************************************997 PP
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2 | Wus_type_Homeobox | 102.5 | 3e-33 | 32 | 94 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
a+tRW P+p+Qi+iLe++ +sG+++P++eei+ri+ +Lee+G++ed NVfyWFQNrkaR ++k
PSME_00047342-RA 32 AKTRWHPKPDQIQILEAIVNSGMVNPPREEIKRIRGQLEEFGHVEDVNVFYWFQNRKARVKRK 94
689**********************************************************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MSRFNKNIFH TEGALSHNYV PEKERERTVP VAKTRWHPKP DQIQILEAIV NSGMVNPPRE 60 EIKRIRGQLE EFGHVEDVNV FYWFQNRKAR VKRKRQLQNA EESESRAAKC ARPLSSSSSL 120 TSTTSTSTSV QSQPVTIVNQ APSSSAGPVI SSFAAHHCNQ QVNQKMSTTQ YSYIQPIGAG 180 GATESRGILN EGGVREDSIN IDNSVITVIV NDIAMQVPKE PINLGTFFGD DALLLDSSGH 240 MVQVNEWGFT MEGLEHGATY FLLYIMEKMH AKGYV
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