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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PSME_00047341-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
WOX |
| Protein Properties |
Length: 194aa MW: 21494 Da PI: 10.5102 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00047341-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49 | 1.1e-15 | 33 | 93 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+ ++++q+++Le+ ++ +p +ee++++ +l ++++ +V++WFqNr+a+ k+
PSME_00047341-RA 33 KTRWHPKPDQIQILEAIVNSgMVNPPREEIKRIRGQLeefgHVEDVNVFYWFQNRKARVKR 93
89*****************99*************************************997 PP
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| 2 | Wus_type_Homeobox | 103.4 | 1.5e-33 | 32 | 95 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
a+tRW P+p+Qi+iLe++ +sG+++P++eei+ri+ +Lee+G++ed NVfyWFQNrkaR ++k+
PSME_00047341-RA 32 AKTRWHPKPDQIQILEAIVNSGMVNPPREEIKRIRGQLEEFGHVEDVNVFYWFQNRKARVKRKR 95
689**********************************************************995 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MSRFNKNIFH TEGALSHNYV PEKERERTVP VAKTRWHPKP DQIQILEAIV NSGMVNPPRE 60
EIKRIRGQLE EFGHVEDVNV FYWFQNRKAR VKRKRQLQNA DKSESRAAKC ARPLSSSSSS 120
LTSTTSTSTS VQSQPVTIVN QAPSSSAGPV ISSFAGHHCN QQANQKMSTT QYSNIQSIGA 180
GGATESRGIL NEGT
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