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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00046305-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
ERF |
Protein Properties |
Length: 201aa MW: 22314.6 Da PI: 10.5844 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00046305-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 46.1 | 1.3e-14 | 36 | 85 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54
+y+G r++ +g+++AeIrd g + ++++lg+f t eeAa a+++a++ ++
PSME_00046305-RA 36 RYRGLRRRL-WGKFAAEIRDS---GrRGAQVWLGTFKTTEEAAMAYDKAALLIR 85
8*****777.**********4...5444*********************98765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MAIPGATGST AYTPAICNTK MTRAQGEAAE KPSTKRYRGL RRRLWGKFAA EIRDSGRRGA 60 QVWLGTFKTT EEAAMAYDKA ALLIRRTRAS LNFPIEVVTN ALADTTEKWS SKLISSRKKQ 120 KHIKVSHHHI ELRKKMDAPD AGSTIGVDFS KDDGMSSMSQ KIRSSDDIHR VDFVLESPPL 180 EKRFICSAAS GLVNETKIIY A
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 3e-25 | ethylene-responsive element binding factor 13 |