 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00046305-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
ERF |
| Protein Properties |
Length: 201aa MW: 22314.6 Da PI: 10.5844 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00046305-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 46.1 | 1.3e-14 | 36 | 85 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54
+y+G r++ +g+++AeIrd g + ++++lg+f t eeAa a+++a++ ++
PSME_00046305-RA 36 RYRGLRRRL-WGKFAAEIRDS---GrRGAQVWLGTFKTTEEAAMAYDKAALLIR 85
8*****777.**********4...5444*********************98765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MAIPGATGST AYTPAICNTK MTRAQGEAAE KPSTKRYRGL RRRLWGKFAA EIRDSGRRGA 60
QVWLGTFKTT EEAAMAYDKA ALLIRRTRAS LNFPIEVVTN ALADTTEKWS SKLISSRKKQ 120
KHIKVSHHHI ELRKKMDAPD AGSTIGVDFS KDDGMSSMSQ KIRSSDDIHR VDFVLESPPL 180
EKRFICSAAS GLVNETKIIY A
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G44840.1 | 3e-25 | ethylene-responsive element binding factor 13 |
