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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00046132-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
WOX |
Protein Properties |
Length: 175aa MW: 19697.9 Da PI: 10.0655 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00046132-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 52.2 | 1.1e-16 | 25 | 85 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++++eq+++Le+ + + +p +e+++++++l ++ e++V++WFqNr+ + k+
PSME_00046132-RA 25 KPRWNPKPEQIRILEAIVDSgTVNPPIDEITRITTQLqefgQVGEANVFYWFQNRKSRTKQ 85
89*****************99*************************************996 PP
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2 | Wus_type_Homeobox | 104.2 | 8.4e-34 | 25 | 87 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+P+peQi+iLe++ +sG+++P+ +ei+rit++L+e+G+++++NVfyWFQNrk+R +q+q
PSME_00046132-RA 25 KPRWNPKPEQIRILEAIVDSGTVNPPIDEITRITTQLQEFGQVGEANVFYWFQNRKSRTKQRQ 87
78***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MGTVIPIKNS GTQLQRDEGS PPGPKPRWNP KPEQIRILEA IVDSGTVNPP IDEITRITTQ 60 LQEFGQVGEA NVFYWFQNRK SRTKQRQRQL QASERNKSRE ARTSMNVGNT KANSLRNNGE 120 SSYSSAMPAA SLYMHQDHHS YHRVQVNEET HIDRSSHIQA LAPAHGTCPN TTVQV
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