 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00043566-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
G2-like |
| Protein Properties |
Length: 465aa MW: 51938.2 Da PI: 8.1359 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00043566-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102 | 3.7e-32 | 64 | 118 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt eLH+rFveav++LGG++kAtPk+++ m+v+gLtl+h+kSHLQkYRl
PSME_00043566-RA 64 KPRLRWTAELHDRFVEAVTKLGGPDKATPKAVRTRMGVEGLTLYHLKSHLQKYRL 118
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MNSFVSNFKS QPENRNSTSK LTAQTEKMYQ VKKPTMESHS ERPAMLQEVN VSTETGLVLS 60
TDPKPRLRWT AELHDRFVEA VTKLGGPDKA TPKAVRTRMG VEGLTLYHLK SHLQKYRLGK 120
QPHKEVSVDT SRDGLPHGGP VTGYGSTACR VAEVQVACNS VPSIIPPNMT DTLQITEALR 180
MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYL QSILEKARET LAGYNLGSIG LEATRAELSE 240
LASKVKSECF RSTLSALNFS TIPEIPGLFP ESQIAHQQSQ AADCSTYSCL TSNESSEKSP 300
TENLQAGGRK RPRSAYDNKV QFWQDEIRED MRLQDLTGEE NLSSPSSRTK DSSHVFHERS 360
TSDIVQAEKS GNRLSDKKGK ECDMNGVLVD PPITRTLAFS NALSLQENSQ MYEATKVYTN 420
QDKTRSKGYN KFSKMAEGLD LNSNGDTTVS SKERELDLNG FGWSR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-18 | 64 | 117 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-18 | 64 | 117 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-18 | 64 | 117 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-18 | 64 | 117 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
