 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00042556-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
bHLH |
| Protein Properties |
Length: 159aa MW: 17593.9 Da PI: 10.6719 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00042556-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 24.3 | 5.6e-08 | 63 | 95 | 4 | 36 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapsk 36
h + ErrRR++++++fe L + lP +s+a+s+
PSME_00042556-RA 63 HHLISERRRREKLKESFEALSSFLPRCSRAQSQ 95
68899*********************9844443 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MLSAFGMWRP PSKLSTAPMV EGQYRLKRGL AILRNIHVQR LRQISLSGSY RPPGGTTSTG 60
QVHHLISERR RREKLKESFE ALSSFLPRCS RAQSQEGAQL ESELKNLPRT QSQEVEGTST 120
ARKQQGSTIT EAGDSMEVDE VKEGLVNAAR KYGGPLPSS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 67 | 72 | ERRRRE |
| 2 | 68 | 73 | RRRREK |
