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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00039882-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 127aa MW: 14676.9 Da PI: 9.8665 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00039882-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 96.2 | 5e-30 | 21 | 94 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ e+yfFs+rdkky++g+ +nrat++gyWkat kd ++ s k++ +g+kktLvfy grap+g++tdWvmheyrl
PSME_00039882-RA 21 RDLELYFFSPRDKKYPNGTCTNRATEAGYWKATWKDSKINS-KSSMIGTKKTLVFYGGRAPQGRRTDWVMHEYRL 94
45699************************************.9999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 127 aa
Download sequence Send
to blast |
MLQHLTQFLC LFVDKSFLPN RDLELYFFSP RDKKYPNGTC TNRATEAGYW KATWKDSKIN 60 SKSSMIGTKK TLVFYGGRAP QGRRTDWVMH EYRLDETQCE GAAGVQVPCL NWIKFSLSIK 120 KLENGVK
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-27 | 2 | 96 | 46 | 144 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-27 | 2 | 96 | 46 | 144 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-27 | 2 | 96 | 46 | 144 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-27 | 2 | 96 | 46 | 144 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swm_B | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swm_C | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swm_D | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swp_A | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swp_B | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swp_C | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
3swp_D | 1e-27 | 2 | 96 | 49 | 147 | NAC domain-containing protein 19 |
4dul_A | 1e-27 | 2 | 96 | 46 | 144 | NAC domain-containing protein 19 |
4dul_B | 1e-27 | 2 | 96 | 46 | 144 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC086, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Regulated by the transcription factor APL (AC Q9SAK5). {ECO:0000269|PubMed:25081480}. |