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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00038706-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 290aa MW: 33137.8 Da PI: 7.0868 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00038706-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 176.3 | 8.8e-55 | 44 | 171 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yLk+kv+g k+el ++i+evd+yk+ePwdLp k + +++ e+yfFs rdkky++g+r+nrat++gyWkatgkd++
PSME_00038706-RA 44 LPPGFRFHPTDEELVSYYLKRKVHGWKIEL-DIIPEVDLYKCEPWDLPvKsFLPGSDLEYYFFSARDKKYPNGSRTNRATEAGYWKATGKDRK 135
79****************************.99***************5433444667*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v s + + +g+kktLvfy+grap+g++t Wvmheyrl
PSME_00038706-RA 136 VSS-HMRPIGMKKTLVFYRGRAPHGSRTAWVMHEYRL 171
**9.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
DVNADLIEES IASTLWPFLI CVVFLEREAV NTGSDLAVMA PISLPPGFRF HPTDEELVSY 60 YLKRKVHGWK IELDIIPEVD LYKCEPWDLP VKSFLPGSDL EYYFFSARDK KYPNGSRTNR 120 ATEAGYWKAT GKDRKVSSHM RPIGMKKTLV FYRGRAPHGS RTAWVMHEYR LDEKECEALA 180 SLQDAAVLCR VFKKSGPAPK VGVQYGALVG NDFSCGLDNS WNKNKLLSVE ELSEEEDDKK 240 YSRETYSEII NDTKVDDGVS KRNVVVLKLF WAVTGYKCFE MHILNTRQSR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-55 | 39 | 200 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-55 | 39 | 200 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-55 | 39 | 200 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-55 | 39 | 200 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 6e-55 | 39 | 200 | 15 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-55 | 39 | 200 | 12 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-55 | 39 | 200 | 12 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |