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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00037723-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 337aa MW: 37379 Da PI: 9.9922 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00037723-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 172.1 | 1.7e-53 | 16 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelvv+yLkkk+++++l++ ++i+e+d+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l
PSME_00037723-RA 16 LPPGFRFHPTDEELVVHYLKKKASSTPLPV-TIIAEIDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 107
79****************************.89***************8888999************************************** PP
NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ ++++vg+kk Lvfy gr pkg kt+W+mheyrl
PSME_00037723-RA 108 TStsgGTQKVGVKKALVFYGGRPPKGIKTNWIMHEYRL 145
998888899***************************98 PP
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2 | NAM | 49.4 | 1.5e-15 | 157 | 210 | 78 | 128 |
NAM 78 tksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
k+g +atg+dk++l++ ++++vg+kk Lvfy gr pkg kt+W+mheyrl
PSME_00037723-RA 157 NKKGSLRATGTDKPILTStsgGTQKVGVKKALVFYGGRPPKGIKTNWIMHEYRL 210
4678899*********998888899***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MESPASFSGS HQQPQLPPGF RFHPTDEELV VHYLKKKASS TPLPVTIIAE IDLYKFDPWE 60 LPGKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPILTST SGGTQKVGVK 120 KALVFYGGRP PKGIKTNWIM HEYRLADSGA RPSSFPNKKG SLRATGTDKP ILTSTSGGTQ 180 KVGVKKALVF YGGRPPKGIK TNWIMHEYRL ADSGARPSSF PNKKGSLRLD DWVLCRIYKK 240 NGHSQRVQGA ERDESPSADE VMTSLPNIEQ QNKLQLPKLG PFSGLLETDD PFIEGLLNDE 300 AMDGNGNISR LPHQVHSSDL SHNNFSNSNN NNSDFQF
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-65 | 13 | 246 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-65 | 13 | 246 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-65 | 13 | 246 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-65 | 13 | 246 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-65 | 13 | 246 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-65 | 13 | 246 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-65 | 13 | 246 | 14 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family associated with male fertility. {ECO:0000250}. |