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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PSME_00034190-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
NAC |
| Protein Properties |
Length: 383aa MW: 43987.9 Da PI: 4.7106 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00034190-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 130.6 | 1.2e-40 | 92 | 218 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
pGfrF Pt+eel+++yLkk+++g + l+l+ +i++v++y+++Pw+Lp ++ +e++w+fF++rd++++ r++r+t sg+Wkatg+d++v
PSME_00034190-RA 92 PGFRFYPTEEELLSFYLKKRITGCDqLNLDIIIPTVQLYHYDPWELPgFVHYVGERQWFFFVPRDHNKPC-PRPSRMTVSGFWKATGSDRAVR 183
9********************99875777667***************666777999**********9985.8********************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + +glkk+Lvfykg+ap +++tdW+m+eyr+
PSME_00034190-RA 184 NELLQCIGLKKILVFYKGKAPCAQRTDWIMNEYRM 218
*99999***************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MRCDPCNDGM RCDTFDDATR RDAHDDAMIV MRCDACEDAA RCDARDDVKR CDSHDDVMIC 60
DVRDNATRCD VMLMMMYRDT MFVKGEEIMD LPGFRFYPTE EELLSFYLKK RITGCDQLNL 120
DIIIPTVQLY HYDPWELPGF VHYVGERQWF FFVPRDHNKP CPRPSRMTVS GFWKATGSDR 180
AVRNELLQCI GLKKILVFYK GKAPCAQRTD WIMNEYRMPD SRLSAPKKTD IVLCRIYRKA 240
ASNKSTEHPA TQDYLDKEEP VVSGDNYGEK SHSVTLDHHD SYQLSNPVEK SDVFSLHYNE 300
DDEGVGSSDP GKSNVKEDSF FDCLEPIMEP IIFSEDTTVL KTPTACNPAQ LELPKLSMDS 360
WLSQPISTYS LLPTPLPIDF PLP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-40 | 92 | 242 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-40 | 92 | 242 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-40 | 92 | 242 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-40 | 92 | 242 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-40 | 92 | 242 | 19 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 1e-40 | 92 | 242 | 19 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
