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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00031114-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 268aa MW: 30620.4 Da PI: 9.2376 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00031114-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 104 | 2e-32 | 23 | 94 | 56 | 128 |
NAM 56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ewyfFs+rdkky++g+++nrat+sgyWkatgkd+++ s +++ +g+kktLvfykgrap+g++tdWvmheyrl
PSME_00031114-RA 23 LEWYFFSPRDKKYSNGTHTNRATESGYWKATGKDRKINS-NSSMIGTKKTLVFYKGRAPQGRRTDWVMHEYRL 94
49*************************************.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MLQHLTLFLC LFADKSFFPN RYLEWYFFSP RDKKYSNGTH TNRATESGYW KATGKDRKIN 60 SNSSMIGTKK TLVFYKGRAP QGRRTDWVMH EYRLDETQFE GAAGVQDAFV LCRVFKKNGI 120 EPRANPTLQS ETSSETLNDR TDNGAPLNQW LQFLLDEPNP TYILTSPANV RHDLKVRSML 180 GGARLEQESL WPMYKIDNFS EGVDDLNFNQ ITSQIEPMLR KMASPNHSQH GSTKSKASSE 240 SREDTIKQEG MSKVLASLSS KKEALQES
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swm_B | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swm_C | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swm_D | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swp_A | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swp_B | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swp_C | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
3swp_D | 1e-33 | 14 | 118 | 61 | 169 | NAC domain-containing protein 19 |
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