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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00030811-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
NAC |
| Protein Properties |
Length: 226aa MW: 25708.1 Da PI: 7.3408 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00030811-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 61.1 | 3.6e-19 | 9 | 61 | 54 | 107 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLv 107
++ ewyfFs++dkky++g+r+nratk+gyWkatgkd+++ s k++ +g+kktL
PSME_00030811-RA 9 RDLEWYFFSPHDKKYPNGTRTNRATKAGYWKATGKDRKINS-KSSMIGTKKTLD 61
4569*************************************.8999******95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MDKSFFPNRD LEWYFFSPHD KKYPNGTRTN RATKAGYWKA TGKDRKINSK SSMIGTKKTL 60
DAFVLCRVCK KNGIEPRVGC CNEPPIKKSA LPSEMNNSFS DKMNKIDKGY TQVKQEEADT 120
QENPTLKLET SSETLNDRTN NGAPLNQWLQ FLLDEPNPTY ILTSPANARH DLTVSFMLGG 180
ARLEQESLWP MFKIDNFSEG LADLSFNQIT SQIEPMLSHT MDACFE
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-15 | 1 | 64 | 57 | 124 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-15 | 1 | 64 | 57 | 124 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-15 | 1 | 64 | 57 | 124 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-15 | 1 | 64 | 57 | 124 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swm_B | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swm_C | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swm_D | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swp_A | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swp_B | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swp_C | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 3swp_D | 1e-15 | 1 | 64 | 60 | 127 | NAC domain-containing protein 19 |
| 4dul_A | 1e-15 | 1 | 64 | 57 | 124 | NAC domain-containing protein 19 |
| 4dul_B | 1e-15 | 1 | 64 | 57 | 124 | NAC domain-containing protein 19 |
